One problem related to manual transmission has been reported for the 2001 Ford Mustang. The most recently reported issues are listed below. Please also check out the statistics and reliability analysis of the 2001 Ford Mustang based on all problems reported for the 2001 Mustang.
2001 cobra has bad synchros and a bad gear. The Ford dealership stated that the car had more than one bad synchro and 2nd gear was bad. Only 20k miles on car. The headliner came down as well.