Five problems related to trunk lid have been reported for the 2006 Honda Civic. The most recently reported issues are listed below. Please also check out the statistics and reliability analysis of the 2006 Honda Civic based on all problems reported for the 2006 Civic.
Honda Civic 2006 ex model: when the tiny piece of plastic inside the trunk release solenoid snaps, the ex model has no alternative method to open the trunk from outside the trunk. Since the ex model lacks an outside key hole and the seat back releases are inside the trunk and the seats are bolted in from the trunk side without a method of removing them without damaging the car, the seats of the car or the trunk lid must be broken (literally cut through the metal) in order to open the trunk from outside the trunk after the solenoid plastic breaks. Since the emergency release mechanism is attached to the solenoid, this flaw could cost the life of a child trapped inside the trunk in the dark. Although this design flaw is now well known with this ex model, Honda refuses to reimburse owners over this problem or recall the part. Their customer service line refuses to handle the problem effectively and refuses to pass on the problem to their engineering department, referring customers only to local deanships without offering any compensation for their faulty product.
I have a 2006 Honda Civic si. The trunk does not have a key entry to it and the wireless entry system was not working to open the trunk. Additionally, I was able to gain access to the trunk by removing the backseat and attempted to pull the emergency trunk release and the trunk will still not open. There has not been an accident nor any event which would have cause the trunk to not open. I went to a Honda dealer and they said that the latch was broken and that it would cost a total of $400 to fix. My concern is that if a child or someone accidentally gets locked in the trunk, there is no way that they would be able to get out unless the trunk is cut into. This defect seems like a safety issue and from reading online, it appears that this has happened to multiple Honda Civic si's. The other difference with this model is that the Civic si does not have a key entry to the trunk so there is no manual override (minus the emergency manual override which does not work).
Paint and clearcoat is peeling on hood, roof, fenders, and trunk lid. Seems to be a clear problem with the type of paint/clearcoat used or application.
I recently had an incident on my 2006 Honda Civic ex coupe in which the trunk lid door jammed and would not open. There are two ways of opening the trunk, one being on the remote and the other being the lever in the driver compartment. (the trunks on these cars do not have a keyed entry. ) upon further investigation, I discovered that the trunk has no access from the outside of the trunk if the lid door will not open. These cars have a 60/40 fold down rear seat that is only able to open from inside the trunk. After speaking with Honda, they confirm that this is in fact the design if the car. My fear is that a small child will accidentally get locked in the truck of the car and the door jams. This could have deadly results because there is no quick way to gain access.
The trunk on our 2006 Civic ex coupe which was assembled in canada has had several problems since delivery. 1. Passenger & driver visors broke off 2. Foot pedal rest broke 3. Passenger side seat trim broke off 4. Trunk will not open at all. This includes pressing the button on the key or using the interior trunk release latch. 5. Rear speaker deck lid has come lose.