One problem related to manual transmission has been reported for the 1999 Mazda B3000. The most recently reported issues are listed below.
Vehicle is experiencing transmission problems, consumer found out that the first owner had the transmission replaced, transmission is continuing to malfunction.
| Differential Unit problems | |
| Driveshaft problems | |
| Power Train problems | |
| Axle Assembly problems | |
| Clutch problems | |
| Manual Transmission problems |